Estimates multiplet rate by using barcode matrix dimensions and formulae from the Saijita Lab's calculator (https://satijalab.org/costpercell/)
EstimateMultipletRate(numCellsRecovered, num10xRuns = 1, chemistry = "10xV3")
Arguments
- numCellsRecovered
The number of cells recovered (number of columns in the count matrix)
- num10xRuns
The number of lanes the cells are loaded into (expected to be 1)
- chemistry
The version of 10x chemistry reagent kit used